Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | DXC16_09495 | Not Available | Negative | 2088791 - 2090107 | 49038.9 |
| carbohydrate kinase | DXC16_09500 | Not Available | Negative | 2090200 - 2091693 | 53489.7 |
| nudix hydrolase | DXC16_09505 | Not Available | Negative | 2091865 - 2092599 | 28586.5 |
| response regulator | DXC16_09510 | Not Available | Positive | 2092955 - 2093320 | 14101.4 |
| sugar transferase | DXC16_09515 | Not Available | Positive | 2093327 - 2094502 | 44978.8 |
| hypothetical protein | DXC16_09520 | Not Available | Positive | 2094539 - 2095402 | 32629.1 |
| hypothetical protein | DXC16_09525 | Not Available | Positive | 2095408 - 2097555 | 82565.7 |
| o-antigen ligase domain-containing protein | DXC16_09530 | Not Available | Positive | 2097559 - 2099019 | 54839.9 |
| glycosyltransferase family 2 protein | DXC16_09535 | Not Available | Positive | 2099000 - 2099905 | 34429.6 |
| glycosyltransferase | DXC16_09540 | Not Available | Positive | 2099902 - 2101026 | 43064.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

