Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4248 domain-containing protein | DXC16_09290 | Not Available | Negative | 2041900 - 2042118 | 8477.29 |
| dna-binding protein | DXC16_09295 | Not Available | Positive | 2042470 - 2042958 | 17535.0 |
| n-acetylmuramoyl-l-alanine amidase | DXC16_09300 | Not Available | Positive | 2043218 - 2043634 | 15858.4 |
| hypothetical protein | DXC16_09305 | Not Available | Positive | 2043805 - 2044119 | 13007.3 |
| toprim domain-containing protein | DXC16_09310 | Not Available | Negative | 2044501 - 2046024 | 58118.9 |
| duf4373 domain-containing protein | DXC16_09315 | Not Available | Negative | 2046498 - 2048177 | 63316.0 |
| hypothetical protein | DXC16_09320 | Not Available | Negative | 2048411 - 2048668 | 9838.79 |
| putative toxin-antitoxin system toxin component, pin family | DXC16_09325 | Not Available | Negative | 2048776 - 2049183 | 15752.8 |
| hypothetical protein | DXC16_09330 | Not Available | Negative | 2049197 - 2049412 | 8582.31 |
| hypothetical protein | DXC16_09335 | Not Available | Negative | 2049602 - 2050420 | 31265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

