Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | DXC16_09240 | Not Available | Negative | 2031083 - 2032864 | 66375.4 |
| duf4276 family protein | DXC16_09245 | Not Available | Negative | 2032984 - 2033646 | 25287.4 |
| duf2813 domain-containing protein | DXC16_09250 | Not Available | Negative | 2033653 - 2034741 | 41425.4 |
| hypothetical protein | DXC16_09255 | Not Available | Negative | 2034942 - 2035145 | 7433.15 |
| c_gcaxxg_c_c family protein | DXC16_09260 | Not Available | Negative | 2035302 - 2035805 | 18588.2 |
| d-2-hydroxyacid dehydrogenase | DXC16_09265 | Not Available | Negative | 2035848 - 2036804 | 34386.8 |
| replication-associated recombination protein a | DXC16_09270 | Not Available | Negative | 2036975 - 2038252 | 47220.9 |
| hypothetical protein | DXC16_09275 | Not Available | Negative | 2038237 - 2038422 | 7650.74 |
| hypothetical protein | DXC16_09280 | Not Available | Positive | 2038493 - 2040568 | 78209.5 |
| quinoprotein amine dehydrogenase | DXC16_09285 | Not Available | Positive | 2040600 - 2041676 | 39505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

