Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | DXC16_00360 | Not Available | Negative | 83736 - 84305 | 21117.3 |
| duf4286 family protein | DXC16_00365 | Not Available | Negative | 84302 - 84607 | 11925.3 |
| Trna-ala | Not Available | Not Available | Positive | 84670 - 84743 | Not Available |
| integrase | DXC16_00375 | Not Available | Positive | 84906 - 86147 | 48246.4 |
| hypothetical protein | DXC16_00380 | Not Available | Negative | 86160 - 86402 | 9299.22 |
| hypothetical protein | DXC16_00385 | Not Available | Negative | 86699 - 86899 | 7471.08 |
| duf882 domain-containing protein | DXC16_00395 | Not Available | Negative | 87405 - 87803 | 15097.0 |
| hypothetical protein | DXC16_00400 | Not Available | Negative | 87800 - 88186 | 15088.7 |
| hypothetical protein | DXC16_00405 | Not Available | Positive | 88282 - 88485 | 7846.43 |
| hypothetical protein | DXC16_00650 | Not Available | Negative | 121797 - 122234 | 16668.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

