Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase gale | DXC16_09140 | Not Available | Negative | 2006293 - 2007327 | 37984.7 |
| hypothetical protein | DXC16_09145 | Not Available | Negative | 2007360 - 2008256 | 33994.2 |
| electron transport complex subunit rsxa | DXC16_09150 | Not Available | Negative | 2008398 - 2009000 | 21298.3 |
| electron transport complex subunit e | DXC16_09155 | Not Available | Negative | 2009019 - 2009603 | 20626.5 |
| rnfabcdge type electron transport complex subunit g | DXC16_09160 | Not Available | Negative | 2009618 - 2010412 | 27098.0 |
| rnfabcdge type electron transport complex subunit d | DXC16_09165 | Not Available | Negative | 2010409 - 2011398 | 35358.5 |
| electron transport complex subunit rsxc | DXC16_09170 | Not Available | Negative | 2011413 - 2012750 | 47118.8 |
| fe-s cluster domain-containing protein | DXC16_09175 | Not Available | Negative | 2012790 - 2013743 | 32597.8 |
| rsec/mucc family positive regulator of sigma(e) | DXC16_09180 | Not Available | Negative | 2013764 - 2014192 | 15752.6 |
| threonine ammonia-lyase | DXC16_09185 | Not Available | Negative | 2014371 - 2015567 | 42410.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

