Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_09085 | Not Available | Negative | 1989948 - 1990922 | 37647.9 |
| type vi secretion system contractile sheath protein tssc | DXC16_09095 | Not Available | Negative | 1995458 - 1996825 | 51642.7 |
| hypothetical protein | DXC16_09100 | Not Available | Negative | 1996831 - 1997304 | 17395.3 |
| hypothetical protein | DXC16_09105 | Not Available | Negative | 1997350 - 1998708 | 52267.1 |
| type iv secretion protein rhs | DXC16_09110 | Not Available | Negative | 1998720 - 2000528 | 66001.2 |
| type vi secretion system needle protein hcp | DXC16_09115 | Not Available | Negative | 2000646 - 2001044 | 15172.8 |
| hypothetical protein | DXC16_09120 | Not Available | Positive | 2001242 - 2001450 | 7718.37 |
| aspartate ammonia-lyase | DXC16_09125 | Not Available | Negative | 2001394 - 2002827 | 52251.4 |
| yitt family protein | DXC16_09130 | Not Available | Negative | 2003091 - 2003981 | 32573.4 |
| lruc domain-containing protein | DXC16_09135 | Not Available | Negative | 2004122 - 2005999 | 71292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

