Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_09025 | Not Available | Negative | 1978947 - 1979144 | 7417.01 |
| sigma-54-dependent fis family transcriptional regulator | DXC16_09030 | Not Available | Negative | 1979172 - 1980491 | 49598.6 |
| response regulator | DXC16_09035 | Not Available | Negative | 1980472 - 1982793 | 87731.8 |
| tetr/acrr family transcriptional regulator | DXC16_09040 | Not Available | Negative | 1983018 - 1983542 | 20235.6 |
| 3-oxoacyl-acp synthase | DXC16_09045 | Not Available | Negative | 1983782 - 1984921 | 42559.4 |
| tetr/acrr family transcriptional regulator | DXC16_09050 | Not Available | Negative | 1984926 - 1985549 | 24099.3 |
| pseudohemocyanin | DXC16_09055 | Not Available | Negative | 1986025 - 1987005 | 38315.4 |
| hypothetical protein | DXC16_09060 | Not Available | Negative | 1986983 - 1987201 | 8500.69 |
| nerd domain-containing protein | DXC16_09065 | Not Available | Negative | 1987325 - 1987876 | 20896.1 |
| atp-binding protein | DXC16_09070 | Not Available | Negative | 1987869 - 1988906 | 39279.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

