Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system protein b | DXC16_08975 | Not Available | Negative | 1970672 - 1971373 | 26864.0 |
| hypothetical protein | DXC16_08980 | Not Available | Negative | 1971384 - 1972493 | 43100.2 |
| prtrc system protein c | DXC16_08985 | Not Available | Negative | 1972530 - 1972751 | 8347.99 |
| prtrc system protein e | DXC16_08990 | Not Available | Negative | 1972773 - 1973771 | 37051.2 |
| hypothetical protein | DXC16_08995 | Not Available | Negative | 1973791 - 1974000 | 7955.67 |
| hypothetical protein | DXC16_09000 | Not Available | Negative | 1974019 - 1974231 | 7770.42 |
| dna topoisomerase iii | DXC16_09005 | Not Available | Negative | 1974530 - 1976302 | 66570.5 |
| duf4099 domain-containing protein | DXC16_09010 | Not Available | Negative | 1976375 - 1976650 | 10101.2 |
| duf3945 domain-containing protein | DXC16_09015 | Not Available | Negative | 1976704 - 1978542 | 69691.5 |
| hypothetical protein | DXC16_09020 | Not Available | Positive | 1978638 - 1978985 | 13523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

