Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | DXC16_08855 | Not Available | Negative | 1942501 - 1943673 | 42892.9 |
| duf418 domain-containing protein | DXC16_08870 | Not Available | Positive | 1945125 - 1946306 | 45342.9 |
| hypothetical protein | DXC16_08875 | Not Available | Negative | 1946455 - 1949922 | 133275.0 |
| alpha-galactosidase | DXC16_08880 | Not Available | Positive | 1950174 - 1952330 | 82569.3 |
| rna polymerase sigma-70 factor | DXC16_08885 | Not Available | Positive | 1953226 - 1953816 | 23553.4 |
| duf4974 domain-containing protein | DXC16_08890 | Not Available | Positive | 1953877 - 1954875 | 38259.8 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_08900 | Not Available | Positive | 1958360 - 1959802 | 53754.5 |
| s9 family peptidase | DXC16_08905 | Not Available | Positive | 1959835 - 1960872 | 39546.7 |
| hypothetical protein | DXC16_08915 | Not Available | Negative | 1962075 - 1962716 | 23912.1 |
| dna primase | DXC16_08920 | Not Available | Positive | 1963196 - 1964059 | 33028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

