Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_08805 | Not Available | Negative | 1934791 - 1935321 | 20186.3 |
| rna polymerase sigma factor | DXC16_08810 | Not Available | Negative | 1935308 - 1935820 | 20100.9 |
| duf4252 domain-containing protein | DXC16_08815 | Not Available | Negative | 1935807 - 1936292 | 18355.6 |
| sdr family nad(p)-dependent oxidoreductase | DXC16_08820 | Not Available | Negative | 1936629 - 1937357 | 27098.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DXC16_08825 | Not Available | Negative | 1937368 - 1938645 | 47021.8 |
| acyl-coa thioesterase | DXC16_08830 | Not Available | Positive | 1938768 - 1939211 | 16882.2 |
| duf1573 domain-containing protein | DXC16_08835 | Not Available | Negative | 1939276 - 1940004 | 27262.7 |
| duf4221 domain-containing protein | DXC16_08840 | Not Available | Negative | 1940001 - 1941155 | 45151.7 |
| hypothetical protein | DXC16_08845 | Not Available | Negative | 1941271 - 1941537 | 9793.29 |
| creatininase family protein | DXC16_08850 | Not Available | Negative | 1941746 - 1942501 | 28446.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

