Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s8 | DXC16_08705 | Not Available | Positive | 1921622 - 1922017 | 14565.0 |
| 50s ribosomal protein l6 | DXC16_08710 | Not Available | Positive | 1922032 - 1922601 | 20910.5 |
| 50s ribosomal protein l18 | DXC16_08715 | Not Available | Positive | 1922623 - 1922964 | 12645.5 |
| 30s ribosomal protein s5 | DXC16_08720 | Not Available | Positive | 1922968 - 1923486 | 17941.0 |
| 50s ribosomal protein l30 | DXC16_08725 | Not Available | Positive | 1923496 - 1923672 | 6433.21 |
| 50s ribosomal protein l15 | DXC16_08730 | Not Available | Positive | 1923703 - 1924149 | 15681.0 |
| preprotein translocase subunit secy | DXC16_08735 | Not Available | Positive | 1924154 - 1925500 | 49282.7 |
| type i methionyl aminopeptidase | DXC16_08740 | Not Available | Positive | 1925511 - 1926308 | 29142.0 |
| translation initiation factor if-1 | DXC16_08745 | Not Available | Positive | 1926310 - 1926528 | 8235.14 |
| 50s ribosomal protein l36 | DXC16_08750 | Not Available | Positive | 1926543 - 1926659 | 4586.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

