Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DXC16_08505 | Not Available | Negative | 1892915 - 1893232 | 12132.6 |
| porin family protein | DXC16_08510 | Not Available | Negative | 1893346 - 1893837 | 18009.4 |
| gamma carbonic anhydrase family protein | DXC16_08515 | Not Available | Negative | 1893883 - 1894407 | 18518.4 |
| aminopeptidase p family protein | DXC16_08520 | Not Available | Negative | 1894417 - 1896198 | 66815.2 |
| 30s ribosomal protein s21 | DXC16_08525 | Not Available | Positive | 1896367 - 1896558 | 7540.39 |
| recombinase | DXC16_08530 | Not Available | Positive | 1896636 - 1897517 | 33990.5 |
| ribosome-associated translation inhibitor raia | DXC16_08535 | Not Available | Positive | 1897532 - 1897831 | 11325.7 |
| Trna-thr | Not Available | Not Available | Positive | 1897930 - 1898006 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1898047 - 1898129 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1898163 - 1898235 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

