Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DXC16_08405 | Not Available | Negative | 1862908 - 1863810 | 35311.8 |
| hypothetical protein | DXC16_08410 | Not Available | Positive | 1864022 - 1864702 | 24715.3 |
| glycoside hydrolase family 37 | DXC16_08415 | Not Available | Positive | 1864863 - 1866245 | 53250.0 |
| rna polymerase sigma-70 factor | DXC16_08420 | Not Available | Positive | 1866248 - 1866850 | 23598.8 |
| duf4974 domain-containing protein | DXC16_08425 | Not Available | Positive | 1866915 - 1867901 | 38366.9 |
| susc/raga family tonb-linked outer membrane protein | DXC16_08430 | Not Available | Positive | 1867930 - 1871199 | 122381.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_08435 | Not Available | Positive | 1871219 - 1872916 | 64614.2 |
| hybrid sensor histidine kinase/response regulator | DXC16_08440 | Not Available | Positive | 1873092 - 1877414 | 165081.0 |
| duf5060 domain-containing protein | DXC16_08445 | Not Available | Positive | 1877579 - 1879183 | 61910.9 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | DXC16_08450 | Not Available | Positive | 1879305 - 1879919 | 22216.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

