Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | DXC16_08350 | Not Available | Positive | 1845144 - 1845815 | 25505.9 |
| hypothetical protein | DXC16_08355 | Not Available | Negative | 1845880 - 1846185 | 10798.8 |
| sigma-54-dependent fis family transcriptional regulator | DXC16_08360 | Not Available | Negative | 1846470 - 1847852 | 51219.5 |
| response regulator | DXC16_08365 | Not Available | Negative | 1847954 - 1850521 | 96914.3 |
| mate family efflux transporter | DXC16_08370 | Not Available | Negative | 1850535 - 1851845 | 48579.2 |
| insulinase family protein | DXC16_08375 | Not Available | Negative | 1851939 - 1853183 | 47349.5 |
| peptidylprolyl isomerase | DXC16_08380 | Not Available | Negative | 1853196 - 1854041 | 31477.6 |
| hypothetical protein | DXC16_08390 | Not Available | Positive | 1854754 - 1859403 | 171871.0 |
| hypothetical protein | DXC16_08395 | Not Available | Positive | 1859400 - 1861757 | 89029.6 |
| nucleotidyltransferase | DXC16_08400 | Not Available | Positive | 1861892 - 1862803 | 33769.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

