Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit cysn | DXC16_08195 | Not Available | Positive | 1802619 - 1804076 | 54496.5 |
| sulfotransferase | DXC16_08200 | Not Available | Positive | 1804104 - 1805210 | 43290.1 |
| hypothetical protein | DXC16_08205 | Not Available | Negative | 1805288 - 1806487 | 43736.0 |
| peroxide stress protein yaaa | DXC16_08210 | Not Available | Negative | 1806594 - 1807361 | 29346.4 |
| tlpa family protein disulfide reductase | DXC16_08215 | Not Available | Positive | 1807449 - 1807949 | 19109.3 |
| tonb-dependent receptor | DXC16_08220 | Not Available | Positive | 1807970 - 1810774 | 106736.0 |
| carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit | DXC16_08225 | Not Available | Negative | 1810840 - 1814061 | 119478.0 |
| hypothetical protein | DXC16_08230 | Not Available | Negative | 1814316 - 1815107 | 29912.6 |
| tryptophan--trna ligase | DXC16_08235 | Not Available | Positive | 1815211 - 1816305 | 41475.9 |
| Trna-val | Not Available | Not Available | Positive | 1816521 - 1816598 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

