Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase | DXC16_08145 | Not Available | Positive | 1791076 - 1791948 | 34104.5 |
| peptidylprolyl isomerase | DXC16_08150 | Not Available | Positive | 1791953 - 1793311 | 52289.8 |
| hypothetical protein | DXC16_08155 | Not Available | Positive | 1793329 - 1794996 | 63852.4 |
| hypothetical protein | DXC16_08160 | Not Available | Positive | 1794999 - 1795295 | 11737.6 |
| dna mismatch repair endonuclease mutl | DXC16_08165 | Not Available | Positive | 1795317 - 1797185 | 68716.8 |
| hypothetical protein | DXC16_08170 | Not Available | Positive | 1797414 - 1798622 | 45833.1 |
| 3'(2'),5'-bisphosphate nucleotidase | DXC16_08175 | Not Available | Positive | 1798637 - 1799446 | 30250.0 |
| slc13/dass family transporter | DXC16_08180 | Not Available | Positive | 1799462 - 1801015 | 56645.7 |
| adenylyl-sulfate kinase | DXC16_08185 | Not Available | Positive | 1801045 - 1801659 | 22681.6 |
| sulfate adenylyltransferase subunit cysd | DXC16_08190 | Not Available | Positive | 1801671 - 1802582 | 35794.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

