Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter atp-binding protein | DXC16_08090 | Not Available | Positive | 1777189 - 1778010 | 31018.3 |
| rna-binding protein | DXC16_08095 | Not Available | Negative | 1778084 - 1778329 | 9049.81 |
| trigger factor | DXC16_08100 | Not Available | Positive | 1778711 - 1780066 | 51572.8 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | DXC16_08105 | Not Available | Positive | 1780247 - 1780918 | 24864.8 |
| atp-dependent clp protease atp-binding subunit clpx | DXC16_08110 | Not Available | Positive | 1781042 - 1782292 | 46679.9 |
| dna helicase recq | DXC16_08115 | Not Available | Positive | 1782450 - 1784630 | 81679.6 |
| helicase | DXC16_08120 | Not Available | Positive | 1785308 - 1787404 | 80591.3 |
| hypothetical protein | DXC16_08125 | Not Available | Negative | 1787528 - 1787962 | 17227.5 |
| imp dehydrogenase | DXC16_08135 | Not Available | Positive | 1788214 - 1789689 | 52760.1 |
| peptidylprolyl isomerase | DXC16_08140 | Not Available | Positive | 1789702 - 1791039 | 52163.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

