Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DXC16_08040 | Not Available | Negative | 1764518 - 1768057 | 130848.0 |
| fecr family protein | DXC16_08045 | Not Available | Negative | 1768175 - 1769194 | 39133.9 |
| rna polymerase sigma-70 factor | DXC16_08050 | Not Available | Positive | 1769331 - 1769912 | 23075.8 |
| duf177 domain-containing protein | DXC16_08055 | Not Available | Positive | 1771327 - 1771860 | 19819.5 |
| 50s ribosomal protein l32 | DXC16_08060 | Not Available | Positive | 1771872 - 1772057 | 6838.3 |
| ketoacyl-acp synthase iii | DXC16_08065 | Not Available | Positive | 1772162 - 1773166 | 36862.4 |
| gtpase era | DXC16_08070 | Not Available | Positive | 1773249 - 1774130 | 33673.8 |
| ribosome biogenesis gtpase der | DXC16_08075 | Not Available | Positive | 1774164 - 1775477 | 49388.4 |
| abc transporter atp-binding protein | DXC16_08080 | Not Available | Negative | 1775556 - 1776320 | 28911.9 |
| abc transporter permease | DXC16_08085 | Not Available | Negative | 1776317 - 1777060 | 27369.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

