Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_07940 | Not Available | Positive | 1733456 - 1733842 | 15254.1 |
| yjgp/yjgq family permease | DXC16_07945 | Not Available | Positive | 1733926 - 1735824 | 72557.6 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | DXC16_07950 | Not Available | Positive | 1735827 - 1737041 | 44935.4 |
| pyridoxal phosphate-dependent aminotransferase | DXC16_07955 | Not Available | Positive | 1737166 - 1738359 | 43014.4 |
| 4fe-4s dicluster domain-containing protein | DXC16_07960 | Not Available | Negative | 1738538 - 1738705 | 5717.65 |
| beta-n-acetylglucosaminidase | DXC16_07965 | Not Available | Negative | 1738808 - 1741801 | 112194.0 |
| bifunctional metallophosphatase/5'-nucleotidase | DXC16_07970 | Not Available | Negative | 1741847 - 1742689 | 31282.2 |
| 5'-nucleotidase | DXC16_07975 | Not Available | Negative | 1742701 - 1743480 | 27882.5 |
| 50s ribosomal protein l19 | DXC16_07980 | Not Available | Positive | 1743678 - 1744031 | 13130.2 |
| hypothetical protein | DXC16_07985 | Not Available | Positive | 1744186 - 1744404 | 7895.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

