Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_07820 | Not Available | Negative | 1706341 - 1707114 | 29926.6 |
| right-handed parallel beta-helix repeat-containing protein | DXC16_07825 | Not Available | Negative | 1707370 - 1709154 | 66746.6 |
| gfo/idh/moca family oxidoreductase | DXC16_07830 | Not Available | Negative | 1709508 - 1711058 | 57379.5 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_07835 | Not Available | Negative | 1711286 - 1713097 | 69418.4 |
| susc/raga family tonb-linked outer membrane protein | DXC16_07840 | Not Available | Negative | 1713115 - 1716516 | 126087.0 |
| duf4974 domain-containing protein | DXC16_07845 | Not Available | Negative | 1716645 - 1717619 | 37350.9 |
| rna polymerase sigma-70 factor | DXC16_07850 | Not Available | Negative | 1717748 - 1718293 | 21708.3 |
| thiol:disulfide interchange protein | DXC16_07860 | Not Available | Negative | 1720688 - 1721878 | 44917.8 |
| hypothetical protein | DXC16_07865 | Not Available | Negative | 1721909 - 1723252 | 51780.7 |
| m56 family peptidase | DXC16_07870 | Not Available | Negative | 1723263 - 1725149 | 70536.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

