Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_07770 | Not Available | Positive | 1695631 - 1695909 | 10779.0 |
| peptide chain release factor 1 | DXC16_07775 | Not Available | Positive | 1695893 - 1697008 | 42032.6 |
| orotidine-5'-phosphate decarboxylase | DXC16_07780 | Not Available | Positive | 1697045 - 1697863 | 30591.6 |
| hd domain-containing protein | DXC16_07785 | Not Available | Positive | 1697952 - 1699187 | 47184.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DXC16_07790 | Not Available | Positive | 1699320 - 1700360 | 36895.4 |
| bifunctional udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase/3-hydroxyacyl-acp dehydratase | DXC16_07795 | Not Available | Positive | 1700366 - 1701751 | 51127.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DXC16_07800 | Not Available | Positive | 1701768 - 1702535 | 27740.6 |
| hypothetical protein | DXC16_07805 | Not Available | Positive | 1702598 - 1703161 | 21611.7 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | DXC16_07810 | Not Available | Positive | 1703213 - 1704115 | 35088.3 |
| alpha-l-fucosidase | DXC16_07815 | Not Available | Positive | 1704124 - 1706163 | 76795.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

