Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | DXC16_07720 | Not Available | Positive | 1683891 - 1684922 | 39611.7 |
| beta-n-acetylhexosaminidase | DXC16_07725 | Not Available | Positive | 1684979 - 1687285 | 85912.1 |
| hypothetical protein | DXC16_07730 | Not Available | Negative | 1687395 - 1687886 | 17873.6 |
| hypothetical protein | DXC16_07735 | Not Available | Negative | 1687905 - 1688126 | 8766.94 |
| carbon starvation protein a | DXC16_07740 | Not Available | Negative | 1688113 - 1689543 | 52285.6 |
| s-layer protein | DXC16_07745 | Not Available | Positive | 1689622 - 1691301 | 64186.7 |
| hypothetical protein | DXC16_07750 | Not Available | Positive | 1691467 - 1691682 | 7928.93 |
| cell filamentation protein fic | DXC16_07755 | Not Available | Negative | 1691650 - 1692648 | 39541.9 |
| hypothetical protein | DXC16_07760 | Not Available | Negative | 1692651 - 1693244 | 22584.9 |
| phosphoribosylformylglycinamidine cyclo-ligase | DXC16_07765 | Not Available | Positive | 1694481 - 1695650 | 42663.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

