Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ia dna topoisomerase | DXC16_07670 | Not Available | Negative | 1676473 - 1678560 | 77608.9 |
| duf4099 domain-containing protein | DXC16_07675 | Not Available | Negative | 1678621 - 1680192 | 59804.1 |
| dna-binding protein | DXC16_07680 | Not Available | Negative | 1680213 - 1680563 | 13925.0 |
| dna-binding protein | DXC16_07685 | Not Available | Negative | 1680567 - 1680929 | 14059.1 |
| hypothetical protein | DXC16_07690 | Not Available | Positive | 1680928 - 1681125 | 7273.61 |
| dna-binding protein | DXC16_07695 | Not Available | Positive | 1681131 - 1681430 | 11590.3 |
| dna-binding protein | DXC16_07700 | Not Available | Positive | 1681462 - 1681767 | 11724.1 |
| rhum protein | DXC16_07705 | Not Available | Negative | 1681845 - 1682207 | 13614.5 |
| site-specific integrase | DXC16_07710 | Not Available | Negative | 1682219 - 1683454 | 47792.0 |
| hypothetical protein | DXC16_07715 | Not Available | Positive | 1683570 - 1683812 | 9342.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

