Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_00210 | Not Available | Negative | 46444 - 46767 | 12222.7 |
| duf4296 domain-containing protein | DXC16_00215 | Not Available | Negative | 46783 - 47757 | 37321.3 |
| lipoprotein signal peptidase | DXC16_00220 | Not Available | Negative | 47761 - 48399 | 24149.8 |
| trar/dksa family transcriptional regulator | DXC16_00225 | Not Available | Negative | 48509 - 48889 | 14347.1 |
| isoleucine--trna ligase | DXC16_00230 | Not Available | Negative | 48913 - 52401 | 132191.0 |
| arac family transcriptional regulator | DXC16_00235 | Not Available | Negative | 52610 - 53443 | 32094.1 |
| peptidase | DXC16_00240 | Not Available | Negative | 53942 - 54760 | 29692.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | DXC16_00245 | Not Available | Negative | 55014 - 55688 | 23919.2 |
| sugar kinase | DXC16_00250 | Not Available | Negative | 55798 - 56820 | 37020.8 |
| laci family dna-binding transcriptional regulator | DXC16_00255 | Not Available | Positive | 57064 - 58137 | 41159.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

