Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | DXC16_07505 | Not Available | Positive | 1630333 - 1630959 | 23477.8 |
| polyprenol monophosphomannose synthase | DXC16_07510 | Not Available | Positive | 1631112 - 1631861 | 28446.6 |
| dihydroorotase | DXC16_07515 | Not Available | Positive | 1631858 - 1633198 | 49602.5 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | DXC16_07520 | Not Available | Positive | 1633195 - 1634082 | 33463.9 |
| metallophosphoesterase | DXC16_07525 | Not Available | Positive | 1634097 - 1635257 | 43681.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | DXC16_07530 | Not Available | Positive | 1635297 - 1636055 | 28645.4 |
| duf4369 domain-containing protein | DXC16_07535 | Not Available | Negative | 1636070 - 1636747 | 25343.6 |
| s46 family peptidase | DXC16_07540 | Not Available | Positive | 1636962 - 1639127 | 81202.0 |
| s46 family peptidase | DXC16_07545 | Not Available | Positive | 1639127 - 1641313 | 82680.6 |
| hypothetical protein | DXC16_07550 | Not Available | Negative | 1641431 - 1641748 | 12033.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

