Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb family protein | DXC16_07455 | Not Available | Negative | 1615192 - 1615878 | 25630.8 |
| transcription-repair coupling factor | DXC16_07460 | Not Available | Negative | 1616143 - 1619508 | 127092.0 |
| duf418 domain-containing protein | DXC16_07465 | Not Available | Positive | 1619616 - 1620800 | 45001.6 |
| tetratricopeptide repeat protein | DXC16_07470 | Not Available | Positive | 1620862 - 1623039 | 86032.4 |
| hypothetical protein | DXC16_07475 | Not Available | Negative | 1623031 - 1623852 | 31598.5 |
| aspartate-alanine antiporter | DXC16_07480 | Not Available | Positive | 1623978 - 1625678 | 61054.4 |
| bifunctional aspartate transaminase/aspartate 4-decarboxylase | DXC16_07485 | Not Available | Positive | 1625698 - 1627338 | 62643.3 |
| peptidase s41 | DXC16_07490 | Not Available | Positive | 1627487 - 1628884 | 52241.7 |
| copper homeostasis protein | DXC16_07495 | Not Available | Positive | 1629041 - 1629529 | 17145.3 |
| duf4136 domain-containing protein | DXC16_07500 | Not Available | Positive | 1629653 - 1630291 | 24018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

