Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | DXC16_07405 | Not Available | Positive | 1604057 - 1604470 | 15301.5 |
| hypothetical protein | DXC16_07410 | Not Available | Negative | 1604680 - 1605639 | 37603.5 |
| hypothetical protein | DXC16_07415 | Not Available | Negative | 1605648 - 1606637 | 38804.3 |
| sdr family nad(p)-dependent oxidoreductase | DXC16_07420 | Not Available | Negative | 1606652 - 1607473 | 30051.3 |
| hypothetical protein | DXC16_07425 | Not Available | Negative | 1607492 - 1608649 | 44412.5 |
| hypothetical protein | DXC16_07430 | Not Available | Negative | 1608653 - 1610185 | 57940.2 |
| 4fe-4s dicluster domain-containing protein | DXC16_07435 | Not Available | Negative | 1610197 - 1611984 | 66794.5 |
| long-chain fatty acid--coa ligase | DXC16_07440 | Not Available | Negative | 1611977 - 1613434 | 53667.3 |
| acyl carrier protein | DXC16_07445 | Not Available | Negative | 1613446 - 1613676 | 8649.34 |
| transcriptional regulator | DXC16_07450 | Not Available | Negative | 1613775 - 1614605 | 31508.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

