Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate oxidoreductase subunit beta | DXC16_07305 | Not Available | Negative | 1582769 - 1583350 | 21245.8 |
| indolepyruvate ferredoxin oxidoreductase | DXC16_07310 | Not Available | Negative | 1583347 - 1584963 | 58880.6 |
| amidohydrolase | DXC16_07315 | Not Available | Negative | 1584987 - 1585748 | 28467.8 |
| dead/deah box helicase | DXC16_07320 | Not Available | Negative | 1585978 - 1588380 | 91141.8 |
| aaa family atpase | DXC16_07325 | Not Available | Negative | 1588520 - 1590088 | 60498.0 |
| hypothetical protein | DXC16_07330 | Not Available | Negative | 1590165 - 1591004 | 31876.0 |
| glycosyltransferase family 1 protein | DXC16_07335 | Not Available | Negative | 1591011 - 1592141 | 43816.9 |
| putative toxin-antitoxin system toxin component, pin family | DXC16_07340 | Not Available | Negative | 1592330 - 1592749 | 15881.1 |
| dephospho-coa kinase | DXC16_07345 | Not Available | Negative | 1592746 - 1592967 | 8641.25 |
| glycosyltransferase | DXC16_07350 | Not Available | Negative | 1593087 - 1594172 | 41270.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

