Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | DXC16_07150 | Not Available | Positive | 1547627 - 1547857 | 8117.04 |
| 3-methyl-2-oxobutanoate dehydrogenase subunit vorb | DXC16_07155 | Not Available | Positive | 1547869 - 1548951 | 39184.6 |
| hypothetical protein | DXC16_07160 | Not Available | Positive | 1548958 - 1549125 | 6434.4 |
| 2-oxoglutarate oxidoreductase | DXC16_07165 | Not Available | Positive | 1549144 - 1549908 | 27912.9 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | DXC16_07170 | Not Available | Positive | 1549922 - 1550464 | 19888.6 |
| hypothetical protein | DXC16_07175 | Not Available | Negative | 1550458 - 1550646 | 7558.39 |
| hypothetical protein | DXC16_07180 | Not Available | Positive | 1550558 - 1552669 | 80812.3 |
| glutamine abc transporter substrate-binding protein | DXC16_07185 | Not Available | Positive | 1552678 - 1553496 | 30961.1 |
| gfo/idh/moca family oxidoreductase | DXC16_07190 | Not Available | Positive | 1553585 - 1554574 | 36847.1 |
| duf4421 domain-containing protein | DXC16_07195 | Not Available | Positive | 1554584 - 1555711 | 43164.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

