Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix family transcriptional regulator | DXC16_00160 | Not Available | Positive | 39206 - 40168 | 37688.8 |
| mbl fold metallo-hydrolase | DXC16_00165 | Not Available | Positive | 40322 - 41125 | 29900.9 |
| Trna-lys | Not Available | Not Available | Positive | 41214 - 41289 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 41311 - 41386 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 41403 - 41478 | Not Available |
| hypothetical protein | DXC16_00185 | Not Available | Negative | 41609 - 41827 | 8572.49 |
| hypothetical protein | DXC16_00190 | Not Available | Negative | 42289 - 42873 | 21939.4 |
| hypothetical protein | DXC16_00195 | Not Available | Negative | 42926 - 43174 | 9625.52 |
| hypothetical protein | DXC16_00200 | Not Available | Negative | 43191 - 45515 | 89006.3 |
| rna methyltransferase | DXC16_00205 | Not Available | Positive | 45617 - 46372 | 27939.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

