Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | DXC16_07050 | Not Available | Positive | 1521098 - 1522360 | 47706.3 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DXC16_07055 | Not Available | Positive | 1522462 - 1524732 | 86308.0 |
| sgnh/gdsl hydrolase family protein | DXC16_07060 | Not Available | Negative | 1524816 - 1526327 | 57342.3 |
| abc-f family atpase | DXC16_07065 | Not Available | Negative | 1526517 - 1528136 | 61289.0 |
| nucleotide exchange factor grpe | DXC16_07070 | Not Available | Positive | 1528314 - 1528934 | 23521.8 |
| molecular chaperone dnaj | DXC16_07075 | Not Available | Positive | 1528954 - 1530129 | 42201.2 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DXC16_07080 | Not Available | Positive | 1530224 - 1531510 | 47992.5 |
| galactose mutarotase | DXC16_07085 | Not Available | Positive | 1531605 - 1532699 | 39972.6 |
| mfs transporter | DXC16_07090 | Not Available | Positive | 1532746 - 1534086 | 47498.5 |
| galactokinase | DXC16_07095 | Not Available | Positive | 1534127 - 1535281 | 42994.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

