Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 1511927 - 1511997 | Not Available |
| ribosome silencing factor | DXC16_07005 | Not Available | Positive | 1512318 - 1512677 | 13409.9 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DXC16_07010 | Not Available | Positive | 1512695 - 1514701 | 74660.1 |
| phosphatidate cytidylyltransferase | DXC16_07015 | Not Available | Positive | 1514860 - 1515699 | 30824.3 |
| hypothetical protein | DXC16_07020 | Not Available | Negative | 1515691 - 1516425 | 27504.9 |
| lipid-a-disaccharide synthase | DXC16_07025 | Not Available | Negative | 1516482 - 1517621 | 43067.6 |
| 5'/3'-nucleotidase sure | DXC16_07030 | Not Available | Negative | 1517618 - 1518391 | 28332.7 |
| para family protein | DXC16_07035 | Not Available | Positive | 1518649 - 1519416 | 28003.1 |
| parb/repb/spo0j family partition protein | DXC16_07040 | Not Available | Positive | 1519420 - 1520316 | 33345.2 |
| hypothetical protein | DXC16_07045 | Not Available | Positive | 1520386 - 1521093 | 26895.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

