Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_06890 | Not Available | Negative | 1487324 - 1487785 | 16708.9 |
| mota/tolq/exbb proton channel family protein | DXC16_06895 | Not Available | Negative | 1487793 - 1488566 | 27566.2 |
| Trna-ser | Not Available | Not Available | Positive | 1488650 - 1488737 | Not Available |
| tatd family deoxyribonuclease | DXC16_06905 | Not Available | Negative | 1488905 - 1489678 | 29266.3 |
| polyprenyl synthetase family protein | DXC16_06910 | Not Available | Negative | 1489680 - 1490657 | 36793.8 |
| energy transducer tonb | DXC16_06915 | Not Available | Negative | 1490739 - 1491422 | 25649.9 |
| (d)cmp kinase | DXC16_06920 | Not Available | Positive | 1491608 - 1492297 | 25745.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DXC16_06925 | Not Available | Positive | 1492290 - 1493156 | 32600.1 |
| 6-phosphofructokinase | DXC16_06930 | Not Available | Positive | 1493238 - 1494218 | 35428.5 |
| methylmalonyl co-a mutase-associated gtpase meab | DXC16_06935 | Not Available | Negative | 1494307 - 1495404 | 40361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

