Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DXC16_06785 | Not Available | Positive | 1466792 - 1467253 | 17839.6 |
| citrate/2-methylcitrate synthase | DXC16_06795 | Not Available | Negative | 1467973 - 1469316 | 51048.6 |
| nadp-dependent isocitrate dehydrogenase | DXC16_06800 | Not Available | Negative | 1469329 - 1470474 | 41576.9 |
| aconitate hydratase | DXC16_06805 | Not Available | Negative | 1470478 - 1472721 | 81126.7 |
| helicase | DXC16_06810 | Not Available | Positive | 1472893 - 1474785 | 72759.6 |
| dihydrolipoamide acyltransferase | DXC16_06815 | Not Available | Negative | 1474970 - 1475344 | 13062.8 |
| hypothetical protein | DXC16_06820 | Not Available | Negative | 1475577 - 1476443 | 33209.6 |
| dna topoisomerase iii | DXC16_06825 | Not Available | Positive | 1476716 - 1478857 | 79859.0 |
| rrna cytosine-c5-methyltransferase | DXC16_06830 | Not Available | Negative | 1478994 - 1480421 | 53364.1 |
| hypothetical protein | DXC16_06835 | Not Available | Positive | 1480553 - 1481260 | 26005.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

