Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxaloacetate decarboxylase | DXC16_06725 | Not Available | Negative | 1457941 - 1458192 | 8725.21 |
| nitroreductase | DXC16_06730 | Not Available | Negative | 1458460 - 1458960 | 18878.7 |
| had family hydrolase | DXC16_06735 | Not Available | Positive | 1459023 - 1459676 | 24293.1 |
| doxx family protein | DXC16_06745 | Not Available | Positive | 1459914 - 1460354 | 16186.6 |
| duf4435 domain-containing protein | DXC16_06750 | Not Available | Negative | 1460360 - 1461355 | 39179.5 |
| atp-binding cassette domain-containing protein | DXC16_06755 | Not Available | Negative | 1461377 - 1462198 | 31108.5 |
| dmt family transporter | DXC16_06760 | Not Available | Positive | 1462281 - 1463207 | 33083.5 |
| sdr family nad(p)-dependent oxidoreductase | DXC16_06765 | Not Available | Negative | 1463315 - 1464175 | 31842.1 |
| nadh:flavin oxidoreductase | DXC16_06770 | Not Available | Negative | 1464172 - 1465395 | 45532.4 |
| duf1295 domain-containing protein | DXC16_06775 | Not Available | Negative | 1465458 - 1466222 | 29496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

