Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4861 domain-containing protein | DXC16_06675 | Not Available | Positive | 1442393 - 1443607 | 45671.0 |
| glycoside hydrolase | DXC16_06680 | Not Available | Positive | 1443621 - 1445285 | 61567.8 |
| sigma-70 family rna polymerase sigma factor | DXC16_06685 | Not Available | Positive | 1445386 - 1445970 | 23217.7 |
| duf4974 domain-containing protein | DXC16_06690 | Not Available | Positive | 1446037 - 1447197 | 44078.4 |
| susc/raga family tonb-linked outer membrane protein | DXC16_06695 | Not Available | Positive | 1447253 - 1450570 | 122563.0 |
| ragb/susd family nutrient uptake outer membrane protein | DXC16_06700 | Not Available | Positive | 1450591 - 1452081 | 55759.7 |
| thioredoxin | DXC16_06705 | Not Available | Positive | 1452100 - 1453266 | 44545.2 |
| tlpa family protein disulfide reductase | DXC16_06710 | Not Available | Positive | 1453268 - 1454617 | 50445.2 |
| sodium ion-translocating decarboxylase subunit beta | DXC16_06715 | Not Available | Negative | 1454813 - 1456048 | 44261.9 |
| oxaloacetate decarboxylase | DXC16_06720 | Not Available | Negative | 1456048 - 1457910 | 68971.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

