Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | DXC16_06625 | Not Available | Positive | 1430302 - 1431135 | 30653.8 |
| fpra family a-type flavoprotein | DXC16_06630 | Not Available | Negative | 1431231 - 1432418 | 44710.8 |
| tigr01212 family radical sam protein | DXC16_06635 | Not Available | Negative | 1432434 - 1433360 | 35539.8 |
| s9 family peptidase | DXC16_06640 | Not Available | Positive | 1433447 - 1435648 | 83440.0 |
| lipoyl synthase | DXC16_06645 | Not Available | Positive | 1435747 - 1436601 | 31713.2 |
| hypothetical protein | DXC16_06650 | Not Available | Positive | 1436659 - 1437648 | 37752.0 |
| sam-dependent methyltransferase | DXC16_06655 | Not Available | Negative | 1437664 - 1438368 | 26022.9 |
| gliding motility lipoprotein gldb | DXC16_06660 | Not Available | Negative | 1438392 - 1439393 | 38875.2 |
| enoyl-acp reductase | DXC16_06665 | Not Available | Negative | 1439401 - 1440258 | 31326.5 |
| glycoside hydrolase family 28 protein | DXC16_06670 | Not Available | Positive | 1440635 - 1442254 | 59176.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

