Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-5b (c(1))-methyltransferase | DXC16_00115 | Not Available | Positive | 28215 - 30011 | 66015.2 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 29921 - 30290 | Not Available |
| abc transporter atp-binding protein | DXC16_00120 | Not Available | Negative | 30033 - 31052 | 37541.6 |
| iron abc transporter permease | DXC16_00125 | Not Available | Negative | 31055 - 32092 | 36729.8 |
| iron abc transporter substrate-binding protein | DXC16_00130 | Not Available | Negative | 32104 - 33255 | 43275.9 |
| precorrin-2 c(20)-methyltransferase | DXC16_00135 | Not Available | Positive | 33359 - 34087 | 27466.2 |
| hypothetical protein | DXC16_00140 | Not Available | Negative | 34050 - 34463 | 15741.7 |
| tagaturonate reductase | DXC16_00145 | Not Available | Negative | 34565 - 36004 | 53907.1 |
| uronate isomerase | DXC16_00150 | Not Available | Positive | 36330 - 37736 | 54309.7 |
| tlpa family protein disulfide reductase | DXC16_00155 | Not Available | Negative | 37825 - 39024 | 46075.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

