Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 1418282 - 1418355 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 1418370 - 1418446 | Not Available |
| carboxypeptidase-like regulatory domain-containing protein | DXC16_06580 | Not Available | Negative | 1421449 - 1423005 | 60100.6 |
| anti-sigma factor | DXC16_06585 | Not Available | Negative | 1423015 - 1423869 | 32355.8 |
| rna polymerase sigma-70 factor | DXC16_06590 | Not Available | Negative | 1423866 - 1424417 | 22089.7 |
| carboxypeptidase-like regulatory domain-containing protein | DXC16_06595 | Not Available | Negative | 1424469 - 1425746 | 49688.8 |
| arc family dna-binding protein | DXC16_06600 | Not Available | Negative | 1425907 - 1426101 | 7530.27 |
| spfh domain-containing protein | DXC16_06605 | Not Available | Negative | 1426110 - 1427060 | 35395.3 |
| tetratricopeptide repeat protein | DXC16_06615 | Not Available | Positive | 1427632 - 1429632 | 76877.1 |
| threonylcarbamoyl-amp synthase | DXC16_06620 | Not Available | Positive | 1429639 - 1430253 | 23089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

