Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DXC16_06455 | Not Available | Negative | 1387967 - 1388470 | 19667.6 |
| trimeric intracellular cation channel family protein | DXC16_06460 | Not Available | Negative | 1388629 - 1389243 | 22186.8 |
| udp-n-acetyl glucosamine 2-epimerase | DXC16_06465 | Not Available | Positive | 1389327 - 1390415 | 40250.0 |
| duf3078 domain-containing protein | DXC16_06470 | Not Available | Negative | 1390515 - 1391909 | 53456.6 |
| ctp synthase | DXC16_06475 | Not Available | Positive | 1392119 - 1393717 | 60081.3 |
| membrane protein insertase yidc | DXC16_06480 | Not Available | Positive | 1393757 - 1395622 | 70945.9 |
| hypothetical protein | DXC16_06485 | Not Available | Negative | 1395552 - 1395785 | 8750.31 |
| s9 family peptidase | DXC16_06490 | Not Available | Positive | 1395850 - 1397955 | 79403.5 |
| xylosidase | DXC16_06495 | Not Available | Negative | 1398311 - 1399746 | 55022.8 |
| glycoside hydrolase family 97 protein | DXC16_06500 | Not Available | Negative | 1399921 - 1401804 | 71896.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

