Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | DXC16_06350 | Not Available | Positive | 1364886 - 1365260 | 14212.0 |
| tetr/acrr family transcriptional regulator | DXC16_06355 | Not Available | Positive | 1365663 - 1366280 | 23930.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | DXC16_06365 | Not Available | Positive | 1367566 - 1368462 | 33034.6 |
| abc transporter atp-binding protein | DXC16_06370 | Not Available | Positive | 1368471 - 1369925 | 54506.0 |
| abc transporter permease | DXC16_06375 | Not Available | Positive | 1369949 - 1371055 | 41435.5 |
| abc transporter permease | DXC16_06380 | Not Available | Positive | 1371068 - 1372174 | 41634.3 |
| transaldolase | DXC16_06385 | Not Available | Positive | 1372271 - 1372927 | 23527.5 |
| arac family transcriptional regulator | DXC16_06390 | Not Available | Positive | 1373079 - 1374002 | 36234.9 |
| hypothetical protein | DXC16_06395 | Not Available | Negative | 1374077 - 1374904 | 31907.4 |
| penicillin-binding protein | DXC16_06400 | Not Available | Negative | 1375111 - 1377438 | 88345.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

