Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase | DXC16_06245 | Not Available | Negative | 1345182 - 1346093 | 32305.3 |
| dihydroorotate dehydrogenase electron transfer subunit | DXC16_06250 | Not Available | Negative | 1346081 - 1346860 | 28483.2 |
| xre family transcriptional regulator | DXC16_06255 | Not Available | Negative | 1346954 - 1347406 | 17319.5 |
| dna polymerase iii subunit delta | DXC16_06265 | Not Available | Negative | 1348528 - 1349544 | 38857.2 |
| amp nucleosidase | DXC16_06270 | Not Available | Negative | 1349556 - 1350332 | 29142.2 |
| hypothetical protein | DXC16_06275 | Not Available | Positive | 1350390 - 1350839 | 17607.4 |
| hypothetical protein | DXC16_06280 | Not Available | Negative | 1350940 - 1351731 | 30517.8 |
| nif3-like dinuclear metal center hexameric protein | DXC16_06285 | Not Available | Negative | 1351740 - 1352834 | 40621.9 |
| hypothetical protein | DXC16_06290 | Not Available | Negative | 1352896 - 1353174 | 10839.2 |
| abc transporter permease | DXC16_06295 | Not Available | Negative | 1353233 - 1354030 | 29543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

