Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_06195 | Not Available | Negative | 1329131 - 1330348 | 45948.8 |
| dna gyrase subunit a | DXC16_06200 | Not Available | Negative | 1330379 - 1332946 | 96391.0 |
| atp-dependent clp protease atp-binding subunit | DXC16_06205 | Not Available | Positive | 1333311 - 1335827 | 93935.9 |
| molecular chaperone htpg | DXC16_06210 | Not Available | Positive | 1335962 - 1338007 | 78122.2 |
| patatin | DXC16_06215 | Not Available | Positive | 1338137 - 1340446 | 87693.7 |
| Trna-arg | Not Available | Not Available | Positive | 1340535 - 1340611 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1340629 - 1340705 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate synthase | DXC16_06230 | Not Available | Negative | 1341050 - 1341943 | 32789.2 |
| dna ligase (nad(+)) liga | DXC16_06235 | Not Available | Negative | 1342045 - 1344042 | 75175.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DXC16_06240 | Not Available | Positive | 1344141 - 1344815 | 25423.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

