Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | DXC16_06145 | Not Available | Positive | 1319078 - 1319947 | 33730.5 |
| hypothetical protein | DXC16_06150 | Not Available | Positive | 1319953 - 1321050 | 41517.0 |
| vwa domain-containing protein | DXC16_06155 | Not Available | Positive | 1321070 - 1322068 | 37254.6 |
| vwa domain-containing protein | DXC16_06160 | Not Available | Positive | 1322081 - 1323103 | 37851.1 |
| tetratricopeptide repeat protein | DXC16_06165 | Not Available | Positive | 1323113 - 1323820 | 27631.4 |
| protein batd | DXC16_06170 | Not Available | Positive | 1323860 - 1325695 | 67647.8 |
| tetratricopeptide repeat protein | DXC16_06175 | Not Available | Positive | 1325715 - 1326533 | 30730.3 |
| phosphatase pap2 family protein | DXC16_06180 | Not Available | Positive | 1326544 - 1327251 | 26838.5 |
| dna-binding protein | DXC16_06185 | Not Available | Positive | 1327381 - 1327650 | 9982.98 |
| universal stress protein | DXC16_06190 | Not Available | Positive | 1327726 - 1328853 | 43153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

