Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DXC16_06095 | Not Available | Positive | 1311032 - 1312051 | 36941.3 |
| cina family protein | DXC16_06100 | Not Available | Positive | 1312073 - 1312573 | 17534.8 |
| 50s ribosomal protein l28 | DXC16_06105 | Not Available | Positive | 1312678 - 1312938 | 9789.04 |
| 50s ribosomal protein l33 | DXC16_06110 | Not Available | Positive | 1312959 - 1313147 | 7205.97 |
| duf4295 domain-containing protein | DXC16_06115 | Not Available | Positive | 1313157 - 1313312 | 5827.19 |
| signal recognition particle-docking protein ftsy | DXC16_06120 | Not Available | Positive | 1313486 - 1314445 | 34716.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DXC16_06125 | Not Available | Positive | 1314449 - 1315747 | 50090.1 |
| hu family dna-binding protein | DXC16_06130 | Not Available | Positive | 1315821 - 1316093 | 10202.5 |
| hu family dna-binding protein | DXC16_06135 | Not Available | Positive | 1316119 - 1317549 | 52603.7 |
| atpase | DXC16_06140 | Not Available | Positive | 1317833 - 1318828 | 37374.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

