Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DXC16_00065 | Not Available | Negative | 17156 - 18043 | 34077.2 |
| arac family transcriptional regulator | DXC16_00070 | Not Available | Negative | 18075 - 18983 | 35423.5 |
| gnat family n-acetyltransferase | DXC16_00080 | Not Available | Positive | 19654 - 20454 | 30582.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 20269 - 21802 | Not Available |
| duf1016 family protein | DXC16_00085 | Not Available | Positive | 20601 - 21704 | 42588.9 |
| flavodoxin | DXC16_00090 | Not Available | Positive | 22004 - 22540 | 19869.9 |
| flavin reductase family protein | DXC16_00095 | Not Available | Positive | 22546 - 23106 | 20230.2 |
| precorrin-3b c(17)-methyltransferase | DXC16_00100 | Not Available | Positive | 23764 - 25170 | 51753.8 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | DXC16_00105 | Not Available | Positive | 25175 - 26356 | 44294.9 |
| precorrin-4 c(11)-methyltransferase | DXC16_00110 | Not Available | Positive | 26378 - 28189 | 67020.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

