Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetyl-adp-ribose deacetylase | DXC16_06045 | Not Available | Positive | 1302475 - 1303101 | 22653.3 |
| hypothetical protein | DXC16_06050 | Not Available | Positive | 1303329 - 1303451 | 4390.24 |
| sigma-54-dependent fis family transcriptional regulator | DXC16_06055 | Not Available | Negative | 1303491 - 1304828 | 49977.5 |
| glycine betaine/l-proline abc transporter atp-binding protein | DXC16_06060 | Not Available | Positive | 1305130 - 1306356 | 45636.3 |
| proline/glycine betaine abc transporter permease | DXC16_06065 | Not Available | Positive | 1306353 - 1307177 | 29538.8 |
| glycine/betaine abc transporter substrate-binding protein | DXC16_06070 | Not Available | Positive | 1307180 - 1308022 | 31726.3 |
| dmt family transporter | DXC16_06075 | Not Available | Positive | 1308167 - 1309075 | 34069.1 |
| sugar o-acetyltransferase | DXC16_06080 | Not Available | Positive | 1309088 - 1309639 | 20098.3 |
| hypothetical protein | DXC16_06085 | Not Available | Negative | 1309699 - 1309917 | 8234.71 |
| type i methionyl aminopeptidase | DXC16_06090 | Not Available | Positive | 1310154 - 1311008 | 31838.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

