Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | DXC16_05995 | Not Available | Negative | 1290878 - 1293130 | 86525.3 |
| aspartate kinase | DXC16_06000 | Not Available | Positive | 1293491 - 1294837 | 50762.8 |
| chloramphenicol acetyltransferase | DXC16_06005 | Not Available | Positive | 1295149 - 1295784 | 24088.7 |
| had family hydrolase | DXC16_06010 | Not Available | Positive | 1295821 - 1296510 | 26385.9 |
| hypothetical protein | DXC16_06015 | Not Available | Negative | 1296507 - 1296752 | 9435.41 |
| hypothetical protein | DXC16_06020 | Not Available | Negative | 1296769 - 1297470 | 25587.2 |
| k(+)-transporting atpase subunit c | DXC16_06025 | Not Available | Negative | 1297744 - 1298313 | 20500.6 |
| k(+)-transporting atpase subunit b | DXC16_06030 | Not Available | Negative | 1298327 - 1300360 | 72504.1 |
| k+-transporting atpase subunit a | DXC16_06035 | Not Available | Negative | 1300394 - 1302100 | 61976.5 |
| potassium-transporting atpase subunit f | DXC16_06040 | Not Available | Negative | 1302127 - 1302207 | 3136.13 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

