Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna recombination protein rmuc | DXC16_05945 | Not Available | Positive | 1280069 - 1281304 | 46960.8 |
| methyltransferase | DXC16_05950 | Not Available | Positive | 1281322 - 1281990 | 24548.2 |
| pas domain-containing sensor histidine kinase | DXC16_05955 | Not Available | Negative | 1282061 - 1283530 | 55121.1 |
| sensor protein kdpd | DXC16_05960 | Not Available | Negative | 1283543 - 1284670 | 42652.1 |
| duf5131 family protein | DXC16_05965 | Not Available | Negative | 1284850 - 1285617 | 29967.7 |
| nudix hydrolase | DXC16_05970 | Not Available | Positive | 1285823 - 1286377 | 21545.7 |
| class i sam-dependent methyltransferase | DXC16_05975 | Not Available | Negative | 1286484 - 1287272 | 29776.4 |
| n-acetyltransferase | DXC16_05980 | Not Available | Negative | 1287544 - 1287999 | 17391.2 |
| class a beta-lactamase, subclass a2 | DXC16_05985 | Not Available | Negative | 1288054 - 1289013 | 36138.6 |
| glycoside hydrolase family 15 protein | DXC16_05990 | Not Available | Negative | 1289072 - 1290859 | 69860.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

