Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain OM08-13BH |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1637192 bp
Thymine Count
1621139 bp
Guanine Count
1179841 bp
Cytosine Count
1218260 bp
Genome Length
5657833 bp
Protein-coding Genes
4696 genes
Non-Coding Genes
141 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DXC16_05845 | Not Available | Negative | 1258002 - 1259108 | 42662.6 |
| is66 family transposase | DXC16_05850 | Not Available | Negative | 1259467 - 1261314 | 71594.7 |
| is66 family insertion sequence hypothetical protein | DXC16_05855 | Not Available | Negative | 1261406 - 1261738 | 13445.5 |
| hypothetical protein | DXC16_05860 | Not Available | Negative | 1261732 - 1262025 | 11174.6 |
| atp-dependent helicase | DXC16_05865 | Not Available | Positive | 1262079 - 1263206 | 42690.5 |
| na(+)-translocating nadh-quinone reductase subunit a | DXC16_05870 | Not Available | Positive | 1263442 - 1264791 | 49524.8 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit b | DXC16_05875 | Not Available | Positive | 1264820 - 1266028 | 43554.0 |
| na(+)-translocating nadh-quinone reductase subunit c | DXC16_05880 | Not Available | Positive | 1266042 - 1266716 | 24676.3 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit d | DXC16_05885 | Not Available | Positive | 1266735 - 1267373 | 23121.2 |
| nadh:ubiquinone reductase (na(+)-transporting) subunit e | DXC16_05890 | Not Available | Positive | 1267398 - 1267994 | 21276.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

